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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24058909_24059074_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24058909 - 24059074

Intron Length:

166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCTGAGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

CTTGTCTGAGAA

Flanking Amino Acid:

VFGTVFRRDQRLIQDVHAFV

Intron Amino Acid Position:

701

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

58.2

0.18

1.2

60.9

39.3

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

45.4

-0.3

1.8

56.84

42.5

Associated Gene:

Gene:

TARBP1

Ensembl Gene ID:

ENSAPLG00000007666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007987

24046224 - 24079762

33539

ENSAPLT00000007982

24046322 - 24079240

32919