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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24059275_24061813_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24059275 - 24061813

Intron Length:

2539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAATCCTTTATT

Flanking Amino Acid:

KGQAYAKIKEIIFKLIDLST

Intron Amino Acid Position:

635

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

1.2

84.1

30.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

88.8

0.87

0.7

36.6

Minor 5ss

39.2

-1.2

2.8

46.3

Minor BPS

70.1

0.71

1.6

82.12

39.3

Associated Gene:

Gene:

TARBP1

Ensembl Gene ID:

ENSAPLG00000007666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007987

24046224 - 24079762

33539

ENSAPLT00000007982

24046322 - 24079240

32919