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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24062003_24062091_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24062003 - 24062091

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTGTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TTTGTCAAATGT

Flanking Amino Acid:

FNCMKVLVPKLLNSSESLCI

Intron Amino Acid Position:

572

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

30.5

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

79.4

0.66

0.8

72.5

37.7

Minor 5ss

31.4

-2.1

3.5

46.6

48.7

Minor BPS

-0.6

2.3

63.58

46.9

Associated Gene:

Gene:

TARBP1

Ensembl Gene ID:

ENSAPLG00000007666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007987

24046224 - 24079762

33539

ENSAPLT00000007982

24046322 - 24079240

32919