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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24063249_24064754_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24063249 - 24064754

Intron Length:

1506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGATCTTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TGATATTTGATT

Flanking Amino Acid:

RNFRETNCKEEPTLKEQIRK

Intron Amino Acid Position:

423

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

88.9

24.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

71.4

0.48

71.2

39.4

Minor 5ss

37.5

-1.4

2.8

51.2

45.3

Minor BPS

59.1

0.37

1.5

73.27

37.6

Associated Gene:

Gene:

TARBP1

Ensembl Gene ID:

ENSAPLG00000007666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007987

24046224 - 24079762

33539

ENSAPLT00000007982

24046322 - 24079240

32919