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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24066098_24069168_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24066098 - 24069168

Intron Length:

3071

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTAGTGAT

5'SS Class:

major

3'SS Sequence:

GCTTTTCACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATGTATTTATTT

Flanking Amino Acid:

RSLKCSNTQDDKVLSFIWKS

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

75.3

34.3

Major BPS

88.7

0.96

0.8

36.5

Major PPT

74.3

0.55

0.9

68.9

36.3

Minor 5ss

30.9

-2.2

3.1

38.9

40.5

Minor BPS

53.1

0.18

1.7

70.85

40.8

Associated Gene:

Gene:

TARBP1

Ensembl Gene ID:

ENSAPLG00000007666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007987

24046224 - 24079762

33539

ENSAPLT00000007982

24046322 - 24079240

32919