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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24069345_24069647_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24069345 - 24069647

Intron Length:

303

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTGTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAATT

Flanking Amino Acid:

ADVEQMRNKSSGKSNIEWIE

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.5

1.12

0.7

90.9

28.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.1

0.68

0.9

77.2

37.1

Minor 5ss

39.3

-1.2

2.8

50.6

45.9

Minor BPS

0.96

86.64

33.8

Associated Gene:

Gene:

TARBP1

Ensembl Gene ID:

ENSAPLG00000007666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007987

24046224 - 24079762

33539

ENSAPLT00000007982

24046322 - 24079240

32919