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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24069745_24070191_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24069745 - 24070191

Intron Length:

447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TATCTTTAATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

ATATCTTTAATT

Flanking Amino Acid:

VEYLKTPASERENCFMPDWF

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.5

27.6

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

70.6

0.46

71.6

38.1

Minor 5ss

42.2

-0.9

2.7

50.9

39.6

Minor BPS

80.3

1.03

87.16

31.9

Associated Gene:

Gene:

TARBP1

Ensembl Gene ID:

ENSAPLG00000007666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007982

24046322 - 24079240

32919

ENSAPLT00000007987

24046224 - 24079762

33539