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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24070331_24072817_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24070331 - 24072817

Intron Length:

2487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTACAGTGT

5'SS Class:

weak_major

3'SS Sequence:

GATTTTAATTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTGATTTTAATT

Flanking Amino Acid:

LPDDRNEPTLLCSWLQVNDR

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.2

0.03

1.1

49.6

41.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.1

0.45

42.2

Minor 5ss

39.3

-1.2

3.7

59.9

46.3

Minor BPS

62.4

0.47

1.3

71.31

40.8

Associated Gene:

Gene:

TARBP1

Ensembl Gene ID:

ENSAPLG00000007666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007987

24046224 - 24079762

33539