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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24073842_24074828_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24073842 - 24074828

Intron Length:

987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTATTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTACTTTTATT

Flanking Amino Acid:

YLMLLPEEEKGSFLLKFIQK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

79.1

0.66

83.5

30.7

Minor 5ss

53.1

0.1

2.3

69.7

41.2

Minor BPS

66.6

0.6

1.6

84.49

36.1

Associated Gene:

Gene:

TARBP1

Ensembl Gene ID:

ENSAPLG00000007666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007987

24046224 - 24079762

33539

ENSAPLT00000007982

24046322 - 24079240

32919