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Intron Name: Anas_platyrhynchos_platyrhynchos_3_2423119_2424521_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2423119 - 2424521

Intron Length:

1403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCGCTG

5'SS Class:

major

3'SS Sequence:

AACACGTCAACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTAACA

Flanking Amino Acid:

NNINDKIKKEELKRSLYALF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.3

55.4

48.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

55.2

0.12

47.3

39.4

Minor 5ss

38.8

-1.3

3.6

55.9

48.3

Minor BPS

86.3

1.14

0.8

90.59

23.6

Associated Gene:

Gene:

SNRPB2

Ensembl Gene ID:

ENSAPLG00000012904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013445

2422792 - 2429362

6571