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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24295116_24302579_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24295116 - 24302579

Intron Length:

7464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTATCGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTATTATTACTT

Flanking Amino Acid:

LLTKLPTISQRCVWHSEESA

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

79.4

28.9

Major BPS

84.7

0.86

74.3

40.7

Major PPT

70.2

0.46

66.1

39.8

Minor 5ss

38.1

-1.3

3.1

48.5

47.7

Minor BPS

56.3

0.28

1.8

77.4

39.3

Associated Gene:

Gene:

TOMM20

Ensembl Gene ID:

ENSAPLG00000004030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020877

24294417 - 24307717

13301