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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24304378_24306819_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24304378 - 24306819

Intron Length:

2442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAACATT

5'SS Class:

major

3'SS Sequence:

ATGGCTTTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATTTCACGAACG

Flanking Amino Acid:

LKNCGNHLYNGRMGRCCHLF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

75.1

41.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

0.59

68.9

41.4

Minor 5ss

44.2

-0.6

57.9

46.5

Minor BPS

49.1

-0.2

2.1

65.43

41.5

Associated Gene:

Gene:

TOMM20

Ensembl Gene ID:

ENSAPLG00000004030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018290

24267706 - 24307717

40012

ENSAPLT00000004148

24301036 - 24307717

6682

ENSAPLT00000020877

24294417 - 24307717

13301