Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_24313393_24314453_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24313393 - 24314453

Intron Length:

1061

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTGAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTTTTCTGAAAA

Flanking Amino Acid:

LSKAGKKLANRESALQQADE

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.8

38.5

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

68.3

0.41

1.2

72.1

Minor 5ss

35.1

-1.7

2.7

42.5

44.3

Minor BPS

70.4

0.64

1.5

81.5

Associated Gene:

Gene:

RBM34

Ensembl Gene ID:

ENSAPLG00000004344

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004466

24308446 - 24315019

6574