Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_24318873_24321205_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24318873 - 24321205

Intron Length:

2333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

GTTTCATTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

CAGTAATTAACA

Flanking Amino Acid:

PKVYKWSFQMSDLENLTSAE

Intron Amino Acid Position:

1194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

83.8

34.5

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

83.7

0.76

0.8

77.6

35.6

Minor 5ss

43.7

-0.7

2.9

61.3

Minor BPS

53.4

0.1

1.8

62.93

42.7

Associated Gene:

Gene:

ARID4B

Ensembl Gene ID:

ENSAPLG00000004422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019607

24317551 - 24373611

56061

ENSAPLT00000004606

24317551 - 24373611

56061