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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24327370_24328463_R


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
24327370 - 24328463

Intron Length:
1094

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATTGTAT

5'SS Class:
major

3'SS Sequence:
TATTTTTAACCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
TTATTTTTAACC

Flanking Amino Acid:
EITSIINGLQASESSDDSEQ

Intron Amino Acid Position:
692

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.4
0.55
1
70.2
36.1

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
76.5
0.6
1
71.4
42.9

Minor 5ss
44.6
-0.6
3.2
64.1
47.4

Minor BPS
79.9
0.92
1
82.59
30.6

Associated Gene:

Gene:
ARID4B

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

24317551 - 24373611
56061

24317551 - 24373611
56061