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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24347189_24347392_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24347189 - 24347392

Intron Length:

204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTTTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

CTTATCAGAATT

Flanking Amino Acid:

AGYNVKCAYKKYLYGFEEYC

Intron Amino Acid Position:

384

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.6

33.2

Major BPS

74.6

0.61

65.6

41.4

Major PPT

82.4

0.73

87.4

29.7

Minor 5ss

39.2

-1.2

2.8

51.8

Minor BPS

49.1

0.01

1.8

70.15

40.9

Associated Gene:

Gene:

ARID4B

Ensembl Gene ID:

ENSAPLG00000004422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019607

24317551 - 24373611

56061

ENSAPLT00000004606

24317551 - 24373611

56061