Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_24369075_24373494_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24369075 - 24373494

Intron Length:

4420

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TATATTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TGATTTATATTT

Flanking Amino Acid:

KTAKRLVKVKVTFRHDSSTV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

77.9

36.9

Major BPS

79.2

0.73

75.3

39.4

Major PPT

0.74

0.8

81.6

35.6

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

47.5

-0.1

1.8

65.81

39.2

Associated Gene:

Gene:

ARID4B

Ensembl Gene ID:

ENSAPLG00000004422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019607

24317551 - 24373611

56061

ENSAPLT00000004606

24317551 - 24373611

56061