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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24472014_24481820_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24472014 - 24481820

Intron Length:

9807

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTATACTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TGTCACTTTATA

Flanking Amino Acid:

CPGGPGRQAAGPLAFFPQWK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

38.2

Major BPS

70.8

0.52

70.6

31.6

Major PPT

79.3

0.66

0.8

71.1

39.8

Minor 5ss

31.2

-2.2

3.4

41.6

45.4

Minor BPS

52.6

0.07

1.8

66.92

38.7

Associated Gene:

Gene:

B3GALNT2

Ensembl Gene ID:

ENSAPLG00000006156

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006382

24454121 - 24481923

27803