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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24563720_24565277_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24563720 - 24565277

Intron Length:

1558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTTGA

5'SS Class:

major

3'SS Sequence:

CTTTCTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTCTCTTACAG

Flanking Amino Acid:

LQILPALFKSRIIRNLFLSC

Intron Amino Acid Position:

789

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.2

67.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

89.3

0.88

0.6

83.8

24.5

Minor 5ss

34.5

-1.8

2.9

41.6

44.9

Minor BPS

55.6

0.04

1.8

65.72

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006672

24562681 - 24573223

10543