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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24572118_24573138_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

24572118 - 24573138

Intron Length:

1021

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTAATTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

TTCCCTCTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.8

86.3

28.9

Major BPS

79.5

0.73

0.9

36.9

Major PPT

76.4

0.6

0.9

69.2

34.6

Minor 5ss

39.6

-1.2

3.2

55.5

42.8

Minor BPS

60.6

0.41

1.7

77.83

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006672

24562681 - 24573223

10543