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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24645754_24647328_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24645754 - 24647328

Intron Length:

1575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATCCAC

5'SS Class:

major

3'SS Sequence:

TCTTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TGTTCTTCAACA

Flanking Amino Acid:

ITTAFAQCPGGHNYCSVNNG

Intron Amino Acid Position:

1300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

65.1

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

93.5

0.98

0.6

92.3

18.1

Minor 5ss

38.2

-1.3

3.1

50.6

45.9

Minor BPS

72.7

0.71

1.5

80.58

34.9

Associated Gene:

Gene:

NID1

Ensembl Gene ID:

ENSAPLG00000007233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021681

24645632 - 24686800

41169

ENSAPLT00000007588

24645632 - 24686800

41169