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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24647442_24648633_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24647442 - 24648633

Intron Length:

1192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTAT

5'SS Class:

major

3'SS Sequence:

TTGTATGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TACACATTAATT

Flanking Amino Acid:

GKNLYYTDWRRDAVVAVDRM

Intron Amino Acid Position:

1262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

78.6

31.1

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

69.2

0.43

1.1

65.5

45.1

Minor 5ss

-0.2

2.5

66.9

44.3

Minor BPS

0.45

1.6

75.33

41.2

Associated Gene:

Gene:

NID1

Ensembl Gene ID:

ENSAPLG00000007233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021681

24645632 - 24686800

41169

ENSAPLT00000007588

24645632 - 24686800

41169