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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24648758_24650135_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24648758 - 24650135

Intron Length:

1378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAGG

5'SS Class:

strong_major

3'SS Sequence:

TCACTATATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TGTTTTTGAATA

Flanking Amino Acid:

YSSMLCWVDAGTKRLECMNP

Intron Amino Acid Position:

1221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

75.1

41.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

0.49

66.3

38.6

Minor 5ss

34.5

-1.8

2.8

42.5

44.3

Minor BPS

64.6

0.45

1.3

72.32

33.6

Associated Gene:

Gene:

NID1

Ensembl Gene ID:

ENSAPLG00000007233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007588

24645632 - 24686800

41169

ENSAPLT00000021681

24645632 - 24686800

41169