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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24651607_24656189_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24651607 - 24656189

Intron Length:

4583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGGA

5'SS Class:

major

3'SS Sequence:

TGTTGTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

CTAGGCTTGATT

Flanking Amino Acid:

GGEPTTIIKTDLGSPEGIAV

Intron Amino Acid Position:

1111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.2

66.1

40.1

Major BPS

0.72

78.4

31.2

Major PPT

83.4

0.75

0.9

77.3

Minor 5ss

35.3

-1.7

3.4

47.8

47.6

Minor BPS

49.7

0.06

1.9

66.98

44.5

Associated Gene:

Gene:

NID1

Ensembl Gene ID:

ENSAPLG00000007233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021681

24645632 - 24686800

41169

ENSAPLT00000007588

24645632 - 24686800

41169