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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24656317_24658269_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24656317 - 24658269

Intron Length:

1953

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TGTTGGCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTGTTTAGCA

Flanking Amino Acid:

NGAKALLHIPDKVIIGVAYD

Intron Amino Acid Position:

1069

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

75.5

34.3

Major BPS

100

1.24

0.5

100

Major PPT

65.8

0.36

41.9

Minor 5ss

38.2

-1.3

2.8

51.4

39.2

Minor BPS

62.3

0.38

78.93

Associated Gene:

Gene:

NID1

Ensembl Gene ID:

ENSAPLG00000007233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021681

24645632 - 24686800

41169

ENSAPLT00000007588

24645632 - 24686800

41169