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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24672554_24673424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24672554 - 24673424

Intron Length:

871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTACA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTGTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TATGTCTGAATG

Flanking Amino Acid:

AMSNSIGPISDGSADINRNP

Intron Amino Acid Position:

756

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

75.1

34.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

83.6

0.75

0.9

84.4

30.5

Minor 5ss

42.2

-0.9

2.4

48.9

42.2

Minor BPS

55.8

0.04

1.6

60.85

41.4

Associated Gene:

Gene:

NID1

Ensembl Gene ID:

ENSAPLG00000007233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021681

24645632 - 24686800

41169

ENSAPLT00000007588

24645632 - 24686800

41169