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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24676807_24678049_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24676807 - 24678049

Intron Length:

1243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATTGATTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CTTGCATTGATT

Flanking Amino Acid:

KGNGRQCVAEGSPQRVNGKV

Intron Amino Acid Position:

523

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

1.1

87.9

29.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

69.6

0.44

1.1

62.3

47.7

Minor 5ss

55.9

0.2

2.5

39.7

Minor BPS

57.9

0.33

1.8

75.82

41.5

Associated Gene:

Gene:

NID1

Ensembl Gene ID:

ENSAPLG00000007233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021681

24645632 - 24686800

41169

ENSAPLT00000007588

24645632 - 24686800

41169