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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24678200_24679221_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24678200 - 24679221

Intron Length:

1022

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGTCT

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

CTGGTCTTATTT

Flanking Amino Acid:

DVEEFDETGIVFRYHTDVQQ

Intron Amino Acid Position:

473

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

73.4

38.1

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

89.2

0.88

0.7

85.2

29.3

Minor 5ss

39.9

-1.1

3.3

57.8

46.4

Minor BPS

51.5

0.12

1.7

66.34

45.4

Associated Gene:

Gene:

NID1

Ensembl Gene ID:

ENSAPLG00000007233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021681

24645632 - 24686800

41169

ENSAPLT00000007588

24645632 - 24686800

41169