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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24746668_24749262_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
24746668 - 24749262

Intron Length:
2595

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAAAATAT

5'SS Class:
major

3'SS Sequence:
TATTCTTATTTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTTAT

U12 Branch Point Sequence:
GTATTCTTATTT

Flanking Amino Acid:
DSQDHFCELDDERSPDAQYV

Intron Amino Acid Position:
139

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.8
0.61
1
72.8
32.2

Major BPS
91.4
1.03
0.7
79.9
34.9

Major PPT
79.1
0.65
0.9
78.4
34.7

Minor 5ss
39.1
-1.2
3.3
52.6
45.6

Minor BPS
64.1
0.52
1.6
77.14
39.6

Associated Gene:

Gene:
ERO1B

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

24737882 - 24767513
29632