Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_24770411_24775080_F

Intron Information:

Intron Rank:

148696

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24770411 - 24775080

Intron Length:

4670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAATTGAA

5'SS Class:

major

3'SS Sequence:

AAATAAAATCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GTTTATTTGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

70.4

35.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

50.1

1.1

39.1

42.7

Minor 5ss

31.6

-2.1

3.1

31.8

42.6

Minor BPS

0.71

1.5

84.99

35.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030043

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020944

24770070 - 24777710

7641