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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24903831_24906500_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24903831 - 24906500

Intron Length:

2670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

CGGGTGCTAACA

Flanking Amino Acid:

RLQLCDTAGQDEFDKLRPLC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.2

35.3

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

81.1

0.7

0.9

77.1

37.1

Minor 5ss

28.4

-2.5

2.9

33.4

41.6

Minor BPS

40.3

-0.7

2.3

47.56

42.9

Associated Gene:

Gene:

RHOU

Ensembl Gene ID:

ENSAPLG00000028150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039528

24903375 - 24908156

4782