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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24906560_24907981_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24906560 - 24907981

Intron Length:

1422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCCCCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTCAC

U12 Branch Point Sequence:

TTGGACTCACCA

Flanking Amino Acid:

QGGDVLLAAAAVVSVDGKPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.9

76.9

38.6

Major BPS

59.5

0.24

1.2

63.3

35.6

Major PPT

66.4

0.37

64.3

31.4

Minor 5ss

30.9

-2.2

3.6

46.8

48.5

Minor BPS

45.8

-0.3

2.1

60.32

45.5

Associated Gene:

Gene:

RHOU

Ensembl Gene ID:

ENSAPLG00000028150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039528

24903375 - 24908156

4782