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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24930866_24931590_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24930866 - 24931590

Intron Length:

725

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTACGGCCG

5'SS Class:

weak_major

3'SS Sequence:

GTGTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

CTTTCAATATCT

Flanking Amino Acid:

VEVAWSPRMTLCAGVCRYEG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.6

0.13

1.2

42.3

44.4

Major BPS

76.9

0.67

1.2

31.9

Major PPT

83.3

0.75

0.9

80.8

36.8

Minor 5ss

32.9

-1.9

3.5

49.1

46.6

Minor BPS

50.6

0.1

2.2

78.25

43.6

Associated Gene:

Gene:

SPRTN

Ensembl Gene ID:

ENSAPLG00000013330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043445

24930492 - 24934929

4438