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Intron Name: Anas_platyrhynchos_platyrhynchos_3_249877_253414_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

249877 - 253414

Intron Length:

3538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAATAA

5'SS Class:

major

3'SS Sequence:

GTTACTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTAGAT

U12 Branch Point Sequence:

TTAGATGTGACT

Flanking Amino Acid:

TSWFSDHEKEEVCTLLEEVV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

67.4

Major BPS

66.8

0.42

1.1

64.4

41.8

Major PPT

81.2

0.7

0.9

77.5

36.7

Minor 5ss

35.5

-1.6

3.3

48.4

Minor BPS

45.4

-0.2

2.2

68.23

Associated Gene:

Gene:

SLX4IP

Ensembl Gene ID:

ENSAPLG00000009267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036500

213038 - 289630

76593

ENSAPLT00000023216

240842 - 288185

47344