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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25372895_25376245_R

Intron Information:

Intron Rank:

128845

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25372895 - 25376245

Intron Length:

3351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATACAGT

5'SS Class:

weak_major

3'SS Sequence:

GCACGCTGCCAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTGCAC

U12 Branch Point Sequence:

TCTCCCTGCACG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.1

60.4

43.9

Major BPS

46.1

-0.2

1.4

54.6

40.8

Major PPT

47.7

-0.1

1.1

40.3

38.2

Minor 5ss

46.7

-0.3

2.8

63.2

43.3

Minor BPS

50.6

-0.1

61.75

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016460

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019824

25372025 - 25376933

4909