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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25385820_25388818_F

Intron Information:

Intron Rank:

143485

Intron Class:

major

Intron Phase:

Intron Coordinates:

25385820 - 25388818

Intron Length:

2999

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGATG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTGGTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAA

U12 Branch Point Sequence:

GAATCTTTAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

75.3

40.4

Major BPS

0.7

0.9

79.6

29.1

Major PPT

61.4

0.26

1.1

37.9

Minor 5ss

35.9

-1.6

3.2

48.4

47.4

Minor BPS

65.4

0.46

1.4

66.93

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027304

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038739

25384678 - 25390010

5333

ENSAPLT00000045744

25383753 - 25390010

6258