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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25436700_25452060_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25436700 - 25452060

Intron Length:

15361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTTACA

Flanking Amino Acid:

SLTPGMGNLRNQRVASFCTL

Intron Amino Acid Position:

1538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

26.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.5

0.96

0.7

87.8

29.2

Minor 5ss

36.1

-1.6

3.3

49.4

41.3

Minor BPS

65.9

0.49

1.6

75.62

35.9

Associated Gene:

Gene:

SIPA1L2

Ensembl Gene ID:

ENSAPLG00000013477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031611

25432790 - 25570377

137588