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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25471189_25484160_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25471189 - 25484160

Intron Length:

12972

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAAGC

5'SS Class:

major

3'SS Sequence:

ATTTGTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

ATCGTTTTATTT

Flanking Amino Acid:

IQPHEDGAPRRGCSELCRIP

Intron Amino Acid Position:

1026

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

69.9

41.1

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

0.7

0.8

74.5

35.8

Minor 5ss

39.4

-1.2

2.9

52.8

43.9

Minor BPS

49.4

0.03

1.6

64.63

41.3

Associated Gene:

Gene:

SIPA1L2

Ensembl Gene ID:

ENSAPLG00000013477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014091

25432790 - 25570377

137588

ENSAPLT00000040453

25432790 - 25570377

137588

ENSAPLT00000031611

25432790 - 25570377

137588