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Intron Name: Anas_platyrhynchos_platyrhynchos_3_2549197_2558147_R

Intron Information:

Intron Rank:

151254

Intron Class:

major

Intron Phase:

Intron Coordinates:

2549197 - 2558147

Intron Length:

8951

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CTAATTGTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

79.5

28.2

Major BPS

84.4

0.85

1.1

34.5

Major PPT

100

1.12

0.4

100

Minor 5ss

28.3

-2.5

2.7

32.3

41.9

Minor BPS

47.3

-0.1

64.2

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028903

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033713

2548625 - 2574103

25479