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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25515164_25540679_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

25515164 - 25540679

Intron Length:

25516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTACAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTCTTTTACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.6

0.49

67.3

37.3

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

0.72

1.5

81.53

33.1

Associated Gene:

Gene:

SIPA1L2

Ensembl Gene ID:

ENSAPLG00000013477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040453

25432790 - 25570377

137588

ENSAPLT00000031611

25432790 - 25570377

137588

ENSAPLT00000014091

25432790 - 25570377

137588