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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25540753_25570037_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

25540753 - 25570037

Intron Length:

29285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGACG

5'SS Class:

strong_major

3'SS Sequence:

GTTTAACTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TCTCGTTTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

76.1

39.5

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

78.1

0.63

0.9

70.7

39.8

Minor 5ss

32.6

-2

3.1

40.4

45.5

Minor BPS

0.55

1.8

80.9

41.2

Associated Gene:

Gene:

SIPA1L2

Ensembl Gene ID:

ENSAPLG00000013477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040453

25432790 - 25570377

137588

ENSAPLT00000031611

25432790 - 25570377

137588

ENSAPLT00000014091

25432790 - 25570377

137588