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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25617997_25618403_F

Intron Information:

Intron Rank:

140155

Intron Class:

major

Intron Phase:

Intron Coordinates:

25617997 - 25618403

Intron Length:

407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAT

U12 Branch Point Sequence:

GGTTCTGCCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

72.2

39.5

Major BPS

63.5

0.34

1.4

57.1

49.4

Major PPT

77.9

0.63

0.9

74.1

35.3

Minor 5ss

34.3

-1.8

2.9

44.2

Minor BPS

41.1

-0.6

2.4

61.2

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025378

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038334

25617434 - 25619154

1721