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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25735467_25739835_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25735467 - 25739835

Intron Length:

4369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTGCA

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TTTCTTTTAAAG

Flanking Amino Acid:

ASSHEVHQRAGRRKHRSQSV

Intron Amino Acid Position:

1806

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

69.6

34.6

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

84.1

0.77

0.9

86.1

25.6

Minor 5ss

39.1

-1.2

50.7

45.7

Minor BPS

65.1

0.33

1.4

69.62

37.6

Associated Gene:

Gene:

PCNX2

Ensembl Gene ID:

ENSAPLG00000008853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029317

25732812 - 25882516

149705

ENSAPLT00000009303

25732812 - 25882516

149705