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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25740018_25740517_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25740018 - 25740517

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTGCAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAGAC

U12 Branch Point Sequence:

TGTATTTAGACT

Flanking Amino Acid:

IKKWFRSKWLRMRKDCHAAH

Intron Amino Acid Position:

1745

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

85.2

32.2

Major BPS

69.3

0.48

1.1

66.7

Major PPT

66.9

0.38

62.3

37.7

Minor 5ss

37.2

-1.4

3.6

57.3

47.4

Minor BPS

51.2

0.12

1.7

71.65

39.6

Associated Gene:

Gene:

PCNX2

Ensembl Gene ID:

ENSAPLG00000008853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029317

25732812 - 25882516

149705

ENSAPLT00000009303

25732812 - 25882516

149705