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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25740793_25741104_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25740793 - 25741104

Intron Length:

312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACATGAA

5'SS Class:

major

3'SS Sequence:

TACCTACCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

TTTTACCTACCT

Flanking Amino Acid:

KSYLSFKVIKVNKECVRGLW

Intron Amino Acid Position:

1654

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

71.1

34.6

Major BPS

68.8

0.47

1.2

63.4

Major PPT

69.6

0.44

0.8

63.3

32.8

Minor 5ss

30.3

-2.3

3.4

46.1

Minor BPS

57.7

0.32

2.1

85.95

39.8

Associated Gene:

Gene:

PCNX2

Ensembl Gene ID:

ENSAPLG00000008853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029317

25732812 - 25882516

149705

ENSAPLT00000009303

25732812 - 25882516

149705