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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25741336_25742578_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25741336 - 25742578

Intron Length:

1243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTCT

5'SS Class:

strong_major

3'SS Sequence:

GTTGTACTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTCAATACTT

Flanking Amino Acid:

AIRMSLKLHQDQFTCPDEYE

Intron Amino Acid Position:

1577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.2

31.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

68.8

0.42

60.2

Minor 5ss

39.4

-1.2

3.3

56.7

47.6

Minor BPS

53.1

0.18

2.1

82.17

39.2

Associated Gene:

Gene:

PCNX2

Ensembl Gene ID:

ENSAPLG00000008853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029317

25732812 - 25882516

149705

ENSAPLT00000009303

25732812 - 25882516

149705