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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25742724_25749135_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25742724 - 25749135

Intron Length:

6412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTGAT

U12 Branch Point Sequence:

GTTTCTGGGACT

Flanking Amino Acid:

LGTAAHNMAISLDSFLYGLH

Intron Amino Acid Position:

1528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

65.8

0.39

1.2

57.3

41.7

Major PPT

83.3

0.75

0.8

77.4

31.4

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

49.7

0.06

2.2

76.45

40.3

Associated Gene:

Gene:

PCNX2

Ensembl Gene ID:

ENSAPLG00000008853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029317

25732812 - 25882516

149705

ENSAPLT00000009303

25732812 - 25882516

149705