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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25785636_25799000_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25785636 - 25799000

Intron Length:

13365

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTAAAAT

U12 Branch Point Sequence:

AGTGCCTAAAAT

Flanking Amino Acid:

FFMMSIVFHKLWDLLQKLQF

Intron Amino Acid Position:

1213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.6

1.15

0.7

90.9

28.7

Major BPS

58.2

0.21

1.2

65.3

36.8

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

35.8

-1.6

4.1

57.8

46.8

Minor BPS

54.3

0.21

1.9

72.47

Associated Gene:

Gene:

PCNX2

Ensembl Gene ID:

ENSAPLG00000008853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029317

25732812 - 25882516

149705

ENSAPLT00000009303

25732812 - 25882516

149705