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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25799179_25804588_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25799179 - 25804588

Intron Length:

5410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

GTATTTCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTGAT

U12 Branch Point Sequence:

TTTGACTTGATT

Flanking Amino Acid:

SISKYKKLGTHCDIILITVA

Intron Amino Acid Position:

1153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.61

69.1

38.5

Major BPS

0.62

65.3

41.5

Major PPT

82.9

0.74

0.9

76.7

37.3

Minor 5ss

41.8

-0.9

2.8

54.8

43.5

Minor BPS

66.1

0.59

1.6

83.92

37.2

Associated Gene:

Gene:

PCNX2

Ensembl Gene ID:

ENSAPLG00000008853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029317

25732812 - 25882516

149705

ENSAPLT00000009303

25732812 - 25882516

149705