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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25804731_25805980_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25804731 - 25805980

Intron Length:

1250

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAA|GCCATTTTC

5'SS Class:

major

3'SS Sequence:

TTTTTTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTTATCTGAATT

Flanking Amino Acid:

LCSYTPQTHLNAAHLMWFER

Intron Amino Acid Position:

1106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.8

0.28

1.3

67.3

40.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

94.3

0.6

93.4

22.5

Minor 5ss

31.6

-2.1

3.9

44.8

Minor BPS

63.8

0.51

1.4

78.28

37.8

Associated Gene:

Gene:

PCNX2

Ensembl Gene ID:

ENSAPLG00000008853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029317

25732812 - 25882516

149705

ENSAPLT00000009303

25732812 - 25882516

149705